Hepatitis B Virus Regulatory Sequence Database (HBVRegDB)

           

Showing 201 bp from AM282986M:Hepatitis B virus (SUBTYPE ADW2), genotype A, modified for HBVRegDB, wait for data to load, positions 1,750 to 1,950

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recenterrecenterrecenterrecenterrecenterrecenterrecenterrecenterrecenterrecenterrecenterrecenterrecenterrecenterrecenterrecenterrecenterrecenterrecenterrecenterDefinition line:  AM282986M:1..3221CDS: C.t01 AM282986M:1901..2458CDS: C.t01 AM282986M:1852..1911CDS: pre C/C.t01 AM282986M:1814..2458CDS: X.t01 AM282986M:1374..1838ORFs (open reading frames).: ORF 4 AM282986M:1814..2455ORFs (open reading frames).: ORF 5 AM282986M:1374..1835regulatory_region: Sequence:C AM282986M:1851..1904TATA_box: C
 AM282986M:1790..1794PolyA_site: C
 AM282986M:1930..1930primer_binding_site:  AM282986M:1824..1834Promoter_prediction: C
 AM282986M:1626..18173-frame translation (forward): AM282986M AM282986M:1750..1950Sequence conservation (CDS-Plotcon): 15_nt_running-mean AM282986M:1750..1950RNA structure conservation pf (Alidot): mtn2 AM282986M:1750..1950NC_005888: Ross's goose hepatitis B virusNC_005890: Sheldgoose hepatitis B virusNC_005950: Snow goose hepatitis B virusProtein Class 2 (80-199): NC_001344: Duck hepatitis B virus AM282986M:90..2840Protein Class 2 (80-199): NC_001484: Ground squirrel hepatitis virus AM282986M:2109..1852Protein Class 2 (80-199): NC_001719: Arctic ground squirrel hepatitis B virus AM282986M:2349..1852Protein Class 2 (80-199): NC_003977: Hepatitis B virus AM282986M:1771..1998Protein Class 2 (80-199): NC_004107: Woodchuck hepatitis B virus AM282986M:2093..1766Protein Class 2 (80-199): NC_005888: Ross's goose hepatitis B virus AM282986M:151..2846Protein Class 2 (80-199): NC_005890: Sheldgoose hepatitis B virus AM282986M:151..2846Protein Class 2 (80-199): NC_005950: Snow goose hepatitis B virus AM282986M:151..2846Protein Class 3 (50-79): NC_001484: Ground squirrel hepatitis virus AM282986M:1842..2126Protein Class 3 (50-79): NC_001486: Heron hepatitis B virus AM282986M:151..2846Protein Class 3 (50-79): NC_001719: Arctic ground squirrel hepatitis B virus AM282986M:1842..2123Protein Class 3 (50-79): NC_004107: Woodchuck hepatitis B virus AM282986M:1771..1974
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- Similar virus nucleotide sequences (RefSeq Viral nucleotide, blastn)
 
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